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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_2 1752 2636 - 3.A.1.1.18
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_3 2647 3528 - 3.A.1.1.32
STP ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_4 3639 5093 - SBP_bac_1
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_5 5263 7119 - 8.A.59.2.1
pfam ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_6 7351 8793 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_7 8815 11208 - GH94
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_2
Type: TC
Location: 1752 - 2636 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_3
Type: TC
Location: 2647 - 3528 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_4
Type: STP
Location: 3639 - 5093 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_5
Type: TC
Location: 5263 - 7119 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_6
Type: pfam
Location: 7351 - 8793 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_7
Type: CAZyme
Location: 8815 - 11208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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