Cluster: ShaoY_2019_ERR3405831_bin.2_CGC48
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_07567
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_122 | 141576 | 142607 | + | 2.A.49.9.3 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_123 | 142641 | 143840 | + | 2.A.36.2.1 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_124 | 144078 | 145391 | + | SBP_bac_1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_125 | 145496 | 146410 | + | 3.A.1.1.34 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_126 | 146412 | 147227 | + | 3.A.1.1.39 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_127 | 147340 | 148863 | + | HTH_AraC | HTH_AraC |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_128 | 148883 | 150565 | + | 8.A.59.2.1 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2754 | ShaoY_2019_ERR3405831_bin.2_k141_2754_129 | 150707 | 152686 | + | GH42 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_122
Type: TC
Location: 141576 - 142607 (+)
Type: TC
Location: 141576 - 142607 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_123
Type: TC
Location: 142641 - 143840 (+)
Type: TC
Location: 142641 - 143840 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_124
Type: STP
Location: 144078 - 145391 (+)
Type: STP
Location: 144078 - 145391 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_125
Type: TC
Location: 145496 - 146410 (+)
Type: TC
Location: 145496 - 146410 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_126
Type: TC
Location: 146412 - 147227 (+)
Type: TC
Location: 146412 - 147227 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_127
Type: TF
Location: 147340 - 148863 (+)
Type: TF
Location: 147340 - 148863 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_128
Type: TC
Location: 148883 - 150565 (+)
Type: TC
Location: 148883 - 150565 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2754_129
Type: CAZyme
Location: 150707 - 152686 (+)
Type: CAZyme
Location: 150707 - 152686 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.