Cluster: ShaoY_2019_ERR3405831_bin.2_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_07564
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2576 | ShaoY_2019_ERR3405831_bin.2_k141_2576_85 | 103749 | 108272 | - | GH51_2 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_2576 | ShaoY_2019_ERR3405831_bin.2_k141_2576_86 | 108595 | 110130 | - | Apiosidase | DUF5060 | DUF5605 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2576 | ShaoY_2019_ERR3405831_bin.2_k141_2576_87 | 110286 | 111125 | - | 3.A.1.1.41 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2576 | ShaoY_2019_ERR3405831_bin.2_k141_2576_88 | 111135 | 112007 | - | 3.A.1.1.32 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_85
Type: CAZyme
Location: 103749 - 108272 (-)
Type: CAZyme
Location: 103749 - 108272 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_86
Type: pfam
Location: 108595 - 110130 (-)
Type: pfam
Location: 108595 - 110130 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_87
Type: TC
Location: 110286 - 111125 (-)
Type: TC
Location: 110286 - 111125 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_88
Type: TC
Location: 111135 - 112007 (-)
Type: TC
Location: 111135 - 112007 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.