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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_2576 ShaoY_2019_ERR3405831_bin.2_k141_2576_26 25935 27704 - GH36
TC ShaoY_2019_ERR3405831_bin.2_k141_2576 ShaoY_2019_ERR3405831_bin.2_k141_2576_27 27714 28550 - 3.A.1.1.36
TC ShaoY_2019_ERR3405831_bin.2_k141_2576 ShaoY_2019_ERR3405831_bin.2_k141_2576_28 28550 29458 - 3.A.1.1.7
TC ShaoY_2019_ERR3405831_bin.2_k141_2576 ShaoY_2019_ERR3405831_bin.2_k141_2576_29 29563 30921 - 3.A.1.1.28
pfam ShaoY_2019_ERR3405831_bin.2_k141_2576 ShaoY_2019_ERR3405831_bin.2_k141_2576_30 31033 37623 - Big_2 | FIVAR | FIVAR | FIVAR | FIVAR | FIVAR
TC ShaoY_2019_ERR3405831_bin.2_k141_2576 ShaoY_2019_ERR3405831_bin.2_k141_2576_31 37884 39788 + 8.A.59.2.1
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_26
Type: CAZyme
Location: 25935 - 27704 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_27
Type: TC
Location: 27714 - 28550 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_28
Type: TC
Location: 28550 - 29458 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_29
Type: TC
Location: 29563 - 30921 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_30
Type: pfam
Location: 31033 - 37623 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2576_31
Type: TC
Location: 37884 - 39788 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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