Cluster: ShaoY_2019_ERR3405831_bin.2_CGC43
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_08322
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2565 | ShaoY_2019_ERR3405831_bin.2_k141_2565_22 | 29223 | 30107 | + | 3.A.1.1.11 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2565 | ShaoY_2019_ERR3405831_bin.2_k141_2565_23 | 30123 | 30950 | + | 3.A.1.1.41 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2565 | ShaoY_2019_ERR3405831_bin.2_k141_2565_24 | 31000 | 33213 | + | GH95 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2565 | ShaoY_2019_ERR3405831_bin.2_k141_2565_25 | 33261 | 34226 | + | CE7 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2565_22
Type: TC
Location: 29223 - 30107 (+)
Type: TC
Location: 29223 - 30107 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2565_23
Type: TC
Location: 30123 - 30950 (+)
Type: TC
Location: 30123 - 30950 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2565_24
Type: CAZyme
Location: 31000 - 33213 (+)
Type: CAZyme
Location: 31000 - 33213 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2565_25
Type: CAZyme
Location: 33261 - 34226 (+)
Type: CAZyme
Location: 33261 - 34226 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.