Cluster: ShaoY_2019_ERR3405831_bin.2_CGC41
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2538 | ShaoY_2019_ERR3405831_bin.2_k141_2538_169 | 221814 | 222710 | + | 3.A.1.1.41 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2538 | ShaoY_2019_ERR3405831_bin.2_k141_2538_170 | 222723 | 223598 | + | 3.A.1.1.6 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2538 | ShaoY_2019_ERR3405831_bin.2_k141_2538_171 | 223687 | 226653 | + | CBM67 | GH78 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2538_169
Type: TC
Location: 221814 - 222710 (+)
Type: TC
Location: 221814 - 222710 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2538_170
Type: TC
Location: 222723 - 223598 (+)
Type: TC
Location: 222723 - 223598 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2538_171
Type: CAZyme
Location: 223687 - 226653 (+)
Type: CAZyme
Location: 223687 - 226653 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.