Cluster: ShaoY_2019_ERR3405831_bin.2_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_906 | ShaoY_2019_ERR3405831_bin.2_k141_906_13 | 16332 | 18608 | + | GH146 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_906 | ShaoY_2019_ERR3405831_bin.2_k141_906_14 | 18632 | 20323 | + | SBP_bac_1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_906 | ShaoY_2019_ERR3405831_bin.2_k141_906_15 | 20400 | 21311 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_906 | ShaoY_2019_ERR3405831_bin.2_k141_906_16 | 21324 | 22220 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_906 | ShaoY_2019_ERR3405831_bin.2_k141_906_17 | 23294 | 24631 | + | 2.A.66.1.33 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_13
Type: CAZyme
Location: 16332 - 18608 (+)
Type: CAZyme
Location: 16332 - 18608 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_14
Type: STP
Location: 18632 - 20323 (+)
Type: STP
Location: 18632 - 20323 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_15
Type: TC
Location: 20400 - 21311 (+)
Type: TC
Location: 20400 - 21311 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_16
Type: TC
Location: 21324 - 22220 (+)
Type: TC
Location: 21324 - 22220 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_17
Type: TC
Location: 23294 - 24631 (+)
Type: TC
Location: 23294 - 24631 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.