Cluster: ShaoY_2019_ERR3405831_bin.2_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_91 | 119519 | 126910 | - | GH101 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_92 | 127327 | 127905 | - | 9.B.156.3.1 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_93 | 128256 | 128888 | - | YhhN |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_94 | 128935 | 130296 | - | 2.A.66.1.34 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_95 | 130665 | 133742 | - | GH2 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_91
Type: CAZyme
Location: 119519 - 126910 (-)
Type: CAZyme
Location: 119519 - 126910 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_92
Type: TC
Location: 127327 - 127905 (-)
Type: TC
Location: 127327 - 127905 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_93
Type: pfam
Location: 128256 - 128888 (-)
Type: pfam
Location: 128256 - 128888 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_94
Type: TC
Location: 128935 - 130296 (-)
Type: TC
Location: 128935 - 130296 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_95
Type: CAZyme
Location: 130665 - 133742 (-)
Type: CAZyme
Location: 130665 - 133742 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.