Cluster: ShaoY_2019_ERR3405831_bin.2_CGC34
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_02636
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_79 | 92147 | 93931 | - | 8.A.59.2.1 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_80 | 94113 | 100646 | - | CBM66 | CBM66 | GH2 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_81 | 100870 | 107406 | - | CBM35 | CBM35 | CBM6 | GH31 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_82 | 107583 | 108779 | - | 3.A.1.2.5 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_83 | 108792 | 110324 | - | 3.A.1.2.5 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_84 | 110421 | 111668 | - | 3.A.1.2.22 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_85 | 112038 | 113072 | - | 3.A.1.2.4 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_86 | 113062 | 114378 | - | HTH_AraC | HTH_AraC |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_87 | 114410 | 115885 | - | 8.A.59.2.1 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_79
Type: TC
Location: 92147 - 93931 (-)
Type: TC
Location: 92147 - 93931 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_80
Type: CAZyme
Location: 94113 - 100646 (-)
Type: CAZyme
Location: 94113 - 100646 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_81
Type: CAZyme
Location: 100870 - 107406 (-)
Type: CAZyme
Location: 100870 - 107406 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_82
Type: TC
Location: 107583 - 108779 (-)
Type: TC
Location: 107583 - 108779 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_83
Type: TC
Location: 108792 - 110324 (-)
Type: TC
Location: 108792 - 110324 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_84
Type: TC
Location: 110421 - 111668 (-)
Type: TC
Location: 110421 - 111668 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_85
Type: TC
Location: 112038 - 113072 (-)
Type: TC
Location: 112038 - 113072 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_86
Type: TF
Location: 113062 - 114378 (-)
Type: TF
Location: 113062 - 114378 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_87
Type: TC
Location: 114410 - 115885 (-)
Type: TC
Location: 114410 - 115885 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.