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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405831_bin.2_k141_2430 ShaoY_2019_ERR3405831_bin.2_k141_2430_68 68419 68943 - 9.B.156.3.1
STP ShaoY_2019_ERR3405831_bin.2_k141_2430 ShaoY_2019_ERR3405831_bin.2_k141_2430_69 69035 70339 - GGDEF
TC ShaoY_2019_ERR3405831_bin.2_k141_2430 ShaoY_2019_ERR3405831_bin.2_k141_2430_70 70471 71316 - 3.A.1.1.18
TC ShaoY_2019_ERR3405831_bin.2_k141_2430 ShaoY_2019_ERR3405831_bin.2_k141_2430_71 71318 72238 - 3.A.1.1.4
STP ShaoY_2019_ERR3405831_bin.2_k141_2430 ShaoY_2019_ERR3405831_bin.2_k141_2430_72 72341 73783 - SBP_bac_1
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_2430 ShaoY_2019_ERR3405831_bin.2_k141_2430_73 73918 81429 - CBM32 | CBM57 | GH136
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_68
Type: TC
Location: 68419 - 68943 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_69
Type: STP
Location: 69035 - 70339 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_70
Type: TC
Location: 70471 - 71316 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_71
Type: TC
Location: 71318 - 72238 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_72
Type: STP
Location: 72341 - 73783 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_73
Type: CAZyme
Location: 73918 - 81429 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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