Cluster: ShaoY_2019_ERR3405831_bin.2_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_2 | 1314 | 3116 | - | 8.A.59.2.1 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_3 | 3338 | 4045 | + | Asp_Glu_race |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2430 | ShaoY_2019_ERR3405831_bin.2_k141_2430_4 | 4082 | 6082 | + | GH127 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_2
Type: TC
Location: 1314 - 3116 (-)
Type: TC
Location: 1314 - 3116 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_3
Type: pfam
Location: 3338 - 4045 (+)
Type: pfam
Location: 3338 - 4045 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2430_4
Type: CAZyme
Location: 4082 - 6082 (+)
Type: CAZyme
Location: 4082 - 6082 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.