Cluster: ShaoY_2019_ERR3405831_bin.2_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1456 | ShaoY_2019_ERR3405831_bin.2_k141_1456_37 | 39349 | 42051 | - | GH106 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1456 | ShaoY_2019_ERR3405831_bin.2_k141_1456_38 | 42068 | 42910 | - | 3.A.1.1.46 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1456 | ShaoY_2019_ERR3405831_bin.2_k141_1456_39 | 42910 | 43893 | - | 3.A.1.1.41 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_1456 | ShaoY_2019_ERR3405831_bin.2_k141_1456_40 | 44019 | 45446 | - | SBP_bac_1 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1456 | ShaoY_2019_ERR3405831_bin.2_k141_1456_41 | 45936 | 48029 | + | GH151 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_37
Type: CAZyme
Location: 39349 - 42051 (-)
Type: CAZyme
Location: 39349 - 42051 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_38
Type: TC
Location: 42068 - 42910 (-)
Type: TC
Location: 42068 - 42910 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_39
Type: TC
Location: 42910 - 43893 (-)
Type: TC
Location: 42910 - 43893 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_40
Type: STP
Location: 44019 - 45446 (-)
Type: STP
Location: 44019 - 45446 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_41
Type: CAZyme
Location: 45936 - 48029 (+)
Type: CAZyme
Location: 45936 - 48029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.