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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_1456 ShaoY_2019_ERR3405831_bin.2_k141_1456_1 580 2160 + CBM91 | GH43_12
STP ShaoY_2019_ERR3405831_bin.2_k141_1456 ShaoY_2019_ERR3405831_bin.2_k141_1456_2 2410 3378 + Peripla_BP_2
TC ShaoY_2019_ERR3405831_bin.2_k141_1456 ShaoY_2019_ERR3405831_bin.2_k141_1456_3 3375 4370 + 3.A.1.14.7
TC ShaoY_2019_ERR3405831_bin.2_k141_1456 ShaoY_2019_ERR3405831_bin.2_k141_1456_4 4370 5374 + 3.A.1.14.15
TC ShaoY_2019_ERR3405831_bin.2_k141_1456 ShaoY_2019_ERR3405831_bin.2_k141_1456_5 5378 6175 + 3.A.1.14.7
pfam ShaoY_2019_ERR3405831_bin.2_k141_1456 ShaoY_2019_ERR3405831_bin.2_k141_1456_6 6177 6695 - Ferritin | Rubrerythrin | Mn_catalase | Ferritin-like
TC ShaoY_2019_ERR3405831_bin.2_k141_1456 ShaoY_2019_ERR3405831_bin.2_k141_1456_7 6987 8300 - 9.A.40.2.1
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_1
Type: CAZyme
Location: 580 - 2160 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_2
Type: STP
Location: 2410 - 3378 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_3
Type: TC
Location: 3375 - 4370 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_4
Type: TC
Location: 4370 - 5374 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_5
Type: TC
Location: 5378 - 6175 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_6
Type: pfam
Location: 6177 - 6695 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1456_7
Type: TC
Location: 6987 - 8300 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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