Cluster: ShaoY_2019_ERR3405831_bin.2_CGC143
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7632 | ShaoY_2019_ERR3405831_bin.2_k141_7632_87 | 121219 | 121950 | - | 9.B.28.1.2 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_7632 | ShaoY_2019_ERR3405831_bin.2_k141_7632_88 | 122469 | 125588 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7632 | ShaoY_2019_ERR3405831_bin.2_k141_7632_89 | 125615 | 128071 | + | GT35 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_87
Type: TC
Location: 121219 - 121950 (-)
Type: TC
Location: 121219 - 121950 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_88
Type: pfam
Location: 122469 - 125588 (+)
Type: pfam
Location: 122469 - 125588 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_89
Type: CAZyme
Location: 125615 - 128071 (+)
Type: CAZyme
Location: 125615 - 128071 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.