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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC141

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_1 350 1714 - GH29
TC ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_2 1740 3524 - 8.A.59.2.1
TF ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_3 3527 4615 - HTH_AraC
TC ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_4 4975 5934 + 3.A.1.1.10
TC ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_5 5949 6887 + 3.A.1.1.29
STP ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_6 6928 8592 + SBP_bac_1
sulfatase ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_7 8594 10069 + S1_26
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_8 10177 15591 + GH111
TC ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_9 15805 17211 + 3.A.1.1.21
TC ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_10 17441 18319 + 3.A.1.1.7
TC ShaoY_2019_ERR3405831_bin.2_k141_7632 ShaoY_2019_ERR3405831_bin.2_k141_7632_11 18331 19176 + 3.A.1.1.18
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_1
Type: CAZyme
Location: 350 - 1714 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_2
Type: TC
Location: 1740 - 3524 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_3
Type: TF
Location: 3527 - 4615 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_4
Type: TC
Location: 4975 - 5934 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_5
Type: TC
Location: 5949 - 6887 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_6
Type: STP
Location: 6928 - 8592 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_7
Type: sulfatase
Location: 8594 - 10069 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_8
Type: CAZyme
Location: 10177 - 15591 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_9
Type: TC
Location: 15805 - 17211 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_10
Type: TC
Location: 17441 - 18319 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7632_11
Type: TC
Location: 18331 - 19176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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