Cluster: ShaoY_2019_ERR3405831_bin.2_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1112 | ShaoY_2019_ERR3405831_bin.2_k141_1112_141 | 150581 | 152479 | - | GH13_11 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1112 | ShaoY_2019_ERR3405831_bin.2_k141_1112_142 | 152482 | 154284 | - | 3.A.1.120.6 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_1112 | ShaoY_2019_ERR3405831_bin.2_k141_1112_143 | 154300 | 155055 | - | Exo_endo_phos |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1112 | ShaoY_2019_ERR3405831_bin.2_k141_1112_144 | 155302 | 156561 | + | 2.A.49.9.2 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_141
Type: CAZyme
Location: 150581 - 152479 (-)
Type: CAZyme
Location: 150581 - 152479 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_142
Type: TC
Location: 152482 - 154284 (-)
Type: TC
Location: 152482 - 154284 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_143
Type: pfam
Location: 154300 - 155055 (-)
Type: pfam
Location: 154300 - 155055 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_144
Type: TC
Location: 155302 - 156561 (+)
Type: TC
Location: 155302 - 156561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.