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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC138

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_7383 ShaoY_2019_ERR3405831_bin.2_k141_7383_144 160986 163502 - GH2
TC ShaoY_2019_ERR3405831_bin.2_k141_7383 ShaoY_2019_ERR3405831_bin.2_k141_7383_145 163549 164397 - 3.A.1.1.41
TC ShaoY_2019_ERR3405831_bin.2_k141_7383 ShaoY_2019_ERR3405831_bin.2_k141_7383_146 164402 165295 - 3.A.1.1.32
STP ShaoY_2019_ERR3405831_bin.2_k141_7383 ShaoY_2019_ERR3405831_bin.2_k141_7383_147 165326 166594 - SBP_bac_1
NULL(UNKNOWN) ShaoY_2019_ERR3405831_bin.2_k141_7383 ShaoY_2019_ERR3405831_bin.2_k141_7383_148 166536 166664 - NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3405831_bin.2_k141_7383 ShaoY_2019_ERR3405831_bin.2_k141_7383_149 166959 168680 + 8.A.59.2.1
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_144
Type: CAZyme
Location: 160986 - 163502 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_145
Type: TC
Location: 163549 - 164397 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_146
Type: TC
Location: 164402 - 165295 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_147
Type: STP
Location: 165326 - 166594 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_148
Type:
Location: 166536 - 166664 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_149
Type: TC
Location: 166959 - 168680 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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