Cluster: ShaoY_2019_ERR3405831_bin.2_CGC137
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_84 | 92969 | 94450 | - | 9.A.11.1.2 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_85 | 94628 | 95302 | - | GntR |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_86 | 95355 | 96230 | - | GHMP_kinases_N | GHMP_kinases_C |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_87 | 96365 | 97933 | - | CBM50 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_84
Type: TC
Location: 92969 - 94450 (-)
Type: TC
Location: 92969 - 94450 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_85
Type: TF
Location: 94628 - 95302 (-)
Type: TF
Location: 94628 - 95302 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_86
Type: pfam
Location: 95355 - 96230 (-)
Type: pfam
Location: 95355 - 96230 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_87
Type: CAZyme
Location: 96365 - 97933 (-)
Type: CAZyme
Location: 96365 - 97933 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.