Cluster: ShaoY_2019_ERR3405831_bin.2_CGC136
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_59 | 63515 | 65503 | + | CBM20 | GH13_1 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_60 | 65592 | 67376 | - | CBM34 | GH13_20 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_61 | 67386 | 68231 | - | 3.A.1.1.6 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7383 | ShaoY_2019_ERR3405831_bin.2_k141_7383_62 | 68231 | 69118 | - | 3.A.1.1.2 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_59
Type: CAZyme
Location: 63515 - 65503 (+)
Type: CAZyme
Location: 63515 - 65503 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_60
Type: CAZyme
Location: 65592 - 67376 (-)
Type: CAZyme
Location: 65592 - 67376 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_61
Type: TC
Location: 67386 - 68231 (-)
Type: TC
Location: 67386 - 68231 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7383_62
Type: TC
Location: 68231 - 69118 (-)
Type: TC
Location: 68231 - 69118 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.