Cluster: ShaoY_2019_ERR3405831_bin.2_CGC135
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_118 | 141869 | 147367 | + | CBM67 | GH78 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_119 | 147551 | 147991 | + | LytTR |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_120 | 147992 | 148489 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_121 | 148492 | 149337 | + | 3.A.1.144.2 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_118
Type: CAZyme
Location: 141869 - 147367 (+)
Type: CAZyme
Location: 141869 - 147367 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_119
Type: TF
Location: 147551 - 147991 (+)
Type: TF
Location: 147551 - 147991 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_120
Type:
Location: 147992 - 148489 (+)
Type:
Location: 147992 - 148489 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_121
Type: TC
Location: 148492 - 149337 (+)
Type: TC
Location: 148492 - 149337 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.