Cluster: ShaoY_2019_ERR3405831_bin.2_CGC134
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_111 | 129948 | 132695 | - | GH38 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_112 | 133205 | 134446 | + | SBP_bac_1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_113 | 134481 | 135401 | + | 3.A.1.1.36 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_114 | 135403 | 136248 | + | 3.A.1.1.18 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_111
Type: CAZyme
Location: 129948 - 132695 (-)
Type: CAZyme
Location: 129948 - 132695 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_112
Type: STP
Location: 133205 - 134446 (+)
Type: STP
Location: 133205 - 134446 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_113
Type: TC
Location: 134481 - 135401 (+)
Type: TC
Location: 134481 - 135401 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_114
Type: TC
Location: 135403 - 136248 (+)
Type: TC
Location: 135403 - 136248 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.