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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC133

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_7269 ShaoY_2019_ERR3405831_bin.2_k141_7269_55 60628 62112 + GH77
TC ShaoY_2019_ERR3405831_bin.2_k141_7269 ShaoY_2019_ERR3405831_bin.2_k141_7269_56 62363 63721 + 2.A.8.1.8
pfam ShaoY_2019_ERR3405831_bin.2_k141_7269 ShaoY_2019_ERR3405831_bin.2_k141_7269_57 63817 64872 + AP_endonuc_2 | UxuA
STP ShaoY_2019_ERR3405831_bin.2_k141_7269 ShaoY_2019_ERR3405831_bin.2_k141_7269_58 65039 66178 + Peripla_BP_1
TC ShaoY_2019_ERR3405831_bin.2_k141_7269 ShaoY_2019_ERR3405831_bin.2_k141_7269_59 66191 67966 + 8.A.59.2.1
TC ShaoY_2019_ERR3405831_bin.2_k141_7269 ShaoY_2019_ERR3405831_bin.2_k141_7269_60 68003 69721 + 8.A.59.2.1
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_55
Type: CAZyme
Location: 60628 - 62112 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_56
Type: TC
Location: 62363 - 63721 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_57
Type: pfam
Location: 63817 - 64872 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_58
Type: STP
Location: 65039 - 66178 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_59
Type: TC
Location: 66191 - 67966 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_60
Type: TC
Location: 68003 - 69721 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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