Cluster: ShaoY_2019_ERR3405831_bin.2_CGC132
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_21 | 21484 | 22506 | + | 2.A.56.1.5 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_22 | 22567 | 23034 | + | 2.A.56.1.5 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_23 | 23036 | 24343 | + | 2.A.56.1.5 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_24 | 24333 | 25220 | - | HTH_AraC | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7269 | ShaoY_2019_ERR3405831_bin.2_k141_7269_25 | 25623 | 26750 | + | GH105 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_21
Type: TC
Location: 21484 - 22506 (+)
Type: TC
Location: 21484 - 22506 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_22
Type: TC
Location: 22567 - 23034 (+)
Type: TC
Location: 22567 - 23034 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_23
Type: TC
Location: 23036 - 24343 (+)
Type: TC
Location: 23036 - 24343 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_24
Type: TF
Location: 24333 - 25220 (-)
Type: TF
Location: 24333 - 25220 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7269_25
Type: CAZyme
Location: 25623 - 26750 (+)
Type: CAZyme
Location: 25623 - 26750 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.