Cluster: ShaoY_2019_ERR3405831_bin.2_CGC131
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_10 | 14064 | 15413 | + | 3.A.1.1.28 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_11 | 15512 | 16375 | + | 3.A.1.1.42 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_12 | 16388 | 17212 | + | 3.A.1.1.18 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_13 | 17274 | 18923 | + | GH66 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_10
Type: TC
Location: 14064 - 15413 (+)
Type: TC
Location: 14064 - 15413 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_11
Type: TC
Location: 15512 - 16375 (+)
Type: TC
Location: 15512 - 16375 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_12
Type: TC
Location: 16388 - 17212 (+)
Type: TC
Location: 16388 - 17212 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_13
Type: CAZyme
Location: 17274 - 18923 (+)
Type: CAZyme
Location: 17274 - 18923 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.