Cluster: ShaoY_2019_ERR3405831_bin.2_CGC130
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_2 | 1944 | 2846 | + | 3.A.1.1.7 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_3 | 2836 | 3675 | + | 3.A.1.1.18 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_4 | 3719 | 5761 | + | GH151 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_7082 | ShaoY_2019_ERR3405831_bin.2_k141_7082_5 | 5953 | 9099 | + | GH38 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_2
Type: TC
Location: 1944 - 2846 (+)
Type: TC
Location: 1944 - 2846 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_3
Type: TC
Location: 2836 - 3675 (+)
Type: TC
Location: 2836 - 3675 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_4
Type: CAZyme
Location: 3719 - 5761 (+)
Type: CAZyme
Location: 3719 - 5761 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_7082_5
Type: CAZyme
Location: 5953 - 9099 (+)
Type: CAZyme
Location: 5953 - 9099 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.