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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_127 131229 132302 + 3.A.1.11.8
TC ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_128 132292 133107 + 3.A.1.11.8
TC ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_129 133107 134978 + 3.A.1.11.7
pfam ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_130 134991 135497 + Flavin_Reduct
TC ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_131 135651 137018 - 2.A.22.5.3
pfam ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_132 137328 138215 + PseudoU_synth_2
pfam ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_133 138243 138740 - HbpS-like
TC ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_134 138832 139089 - 8.A.8.1.1
TC ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_135 139187 141328 - 4.A.1.1.14
pfam ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_136 141483 142319 - PRD | PRD | CAT_RBD
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_1112 ShaoY_2019_ERR3405831_bin.2_k141_1112_137 142621 147981 - CBM51 | GH2
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_127
Type: TC
Location: 131229 - 132302 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_128
Type: TC
Location: 132292 - 133107 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_129
Type: TC
Location: 133107 - 134978 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_130
Type: pfam
Location: 134991 - 135497 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_131
Type: TC
Location: 135651 - 137018 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_132
Type: pfam
Location: 137328 - 138215 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_133
Type: pfam
Location: 138243 - 138740 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_134
Type: TC
Location: 138832 - 139089 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_135
Type: TC
Location: 139187 - 141328 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_136
Type: pfam
Location: 141483 - 142319 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1112_137
Type: CAZyme
Location: 142621 - 147981 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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