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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC129

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405831_bin.2_k141_6997 ShaoY_2019_ERR3405831_bin.2_k141_6997_54 62397 64166 - 9.B.33.1.1
TC ShaoY_2019_ERR3405831_bin.2_k141_6997 ShaoY_2019_ERR3405831_bin.2_k141_6997_55 64396 65319 + 3.A.1.1.25
TC ShaoY_2019_ERR3405831_bin.2_k141_6997 ShaoY_2019_ERR3405831_bin.2_k141_6997_56 65312 66148 + 3.A.1.1.18
STP ShaoY_2019_ERR3405831_bin.2_k141_6997 ShaoY_2019_ERR3405831_bin.2_k141_6997_57 66168 67574 + SBP_bac_1
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_6997 ShaoY_2019_ERR3405831_bin.2_k141_6997_58 67664 70042 + GH95
pfam ShaoY_2019_ERR3405831_bin.2_k141_6997 ShaoY_2019_ERR3405831_bin.2_k141_6997_59 70363 71496 + Phage_integrase | Phage_int_SAM_3
TC ShaoY_2019_ERR3405831_bin.2_k141_6997 ShaoY_2019_ERR3405831_bin.2_k141_6997_60 71747 72355 + 8.A.59.4.1
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6997_54
Type: TC
Location: 62397 - 64166 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6997_55
Type: TC
Location: 64396 - 65319 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6997_56
Type: TC
Location: 65312 - 66148 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6997_57
Type: STP
Location: 66168 - 67574 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6997_58
Type: CAZyme
Location: 67664 - 70042 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6997_59
Type: pfam
Location: 70363 - 71496 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6997_60
Type: TC
Location: 71747 - 72355 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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