Cluster: ShaoY_2019_ERR3405831_bin.2_CGC124
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_117 | 149632 | 150966 | - | GH32 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_118 | 150987 | 152081 | - | 3.A.1.1.27 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_119 | 152086 | 152937 | - | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_120 | 152909 | 153811 | - | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_121 | 153811 | 155133 | - | 3.A.1.1.20 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_117
Type: CAZyme
Location: 149632 - 150966 (-)
Type: CAZyme
Location: 149632 - 150966 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_118
Type: TC
Location: 150987 - 152081 (-)
Type: TC
Location: 150987 - 152081 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_119
Type: TC
Location: 152086 - 152937 (-)
Type: TC
Location: 152086 - 152937 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_120
Type: TC
Location: 152909 - 153811 (-)
Type: TC
Location: 152909 - 153811 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_121
Type: TC
Location: 153811 - 155133 (-)
Type: TC
Location: 153811 - 155133 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.