Cluster: ShaoY_2019_ERR3405831_bin.2_CGC123
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_03089
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_92 | 109907 | 111217 | - | GH4 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_93 | 111293 | 112339 | - | SIS | SIS |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_94 | 112355 | 113275 | - | BcrAD_BadFG |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_95 | 113296 | 114609 | - | GH29 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_96 | 114619 | 115461 | - | 3.A.1.1.47 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_97 | 115477 | 116388 | - | 3.A.1.1.47 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_98 | 116494 | 117954 | - | SBP_bac_1 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_99 | 118209 | 126212 | - | CBM32 | CBM51 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_6898 | ShaoY_2019_ERR3405831_bin.2_k141_6898_100 | 126484 | 131724 | - | CBM51 | GH98 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_92
Type: CAZyme
Location: 109907 - 111217 (-)
Type: CAZyme
Location: 109907 - 111217 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_93
Type: STP
Location: 111293 - 112339 (-)
Type: STP
Location: 111293 - 112339 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_94
Type: pfam
Location: 112355 - 113275 (-)
Type: pfam
Location: 112355 - 113275 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_95
Type: CAZyme
Location: 113296 - 114609 (-)
Type: CAZyme
Location: 113296 - 114609 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_96
Type: TC
Location: 114619 - 115461 (-)
Type: TC
Location: 114619 - 115461 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_97
Type: TC
Location: 115477 - 116388 (-)
Type: TC
Location: 115477 - 116388 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_98
Type: STP
Location: 116494 - 117954 (-)
Type: STP
Location: 116494 - 117954 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_99
Type: CAZyme
Location: 118209 - 126212 (-)
Type: CAZyme
Location: 118209 - 126212 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6898_100
Type: CAZyme
Location: 126484 - 131724 (-)
Type: CAZyme
Location: 126484 - 131724 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.