Cluster: ShaoY_2019_ERR3405831_bin.2_CGC121
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_6391 | ShaoY_2019_ERR3405831_bin.2_k141_6391_152 | 172642 | 173787 | - | GH88 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6391 | ShaoY_2019_ERR3405831_bin.2_k141_6391_153 | 173824 | 175386 | - | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6391 | ShaoY_2019_ERR3405831_bin.2_k141_6391_154 | 175410 | 176309 | - | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6391 | ShaoY_2019_ERR3405831_bin.2_k141_6391_155 | 176322 | 177353 | - | 3.A.1.1.10 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6391_152
Type: CAZyme
Location: 172642 - 173787 (-)
Type: CAZyme
Location: 172642 - 173787 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6391_153
Type: TC
Location: 173824 - 175386 (-)
Type: TC
Location: 173824 - 175386 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6391_154
Type: TC
Location: 175410 - 176309 (-)
Type: TC
Location: 175410 - 176309 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6391_155
Type: TC
Location: 176322 - 177353 (-)
Type: TC
Location: 176322 - 177353 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.