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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC115

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_69 89739 91178 - 2.A.66.2.2
pfam ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_70 91229 92512 - Glycos_transf_1
pfam ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_71 92538 93263 - Hexapep | Hexapep_2 | Hexapep_2
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_72 93348 94562 - GT4
NULL(UNKNOWN) ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_73 94528 96351 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_74 96397 97461 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_75 97469 98608 - GT4
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_76 98617 99441 - GT2
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_77 99444 100607 - GT4
pfam ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_78 100609 104265 - PMT_2
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_79 104231 105202 - GT2
pfam ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_80 105296 106606 - UDPG_MGDP_dh | ApbA | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_81 106938 108536 - HMGL-like
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_6197 ShaoY_2019_ERR3405831_bin.2_k141_6197_82 108772 110517 - GT2
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_69
Type: TC
Location: 89739 - 91178 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_70
Type: pfam
Location: 91229 - 92512 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_71
Type: pfam
Location: 92538 - 93263 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_72
Type: CAZyme
Location: 93348 - 94562 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_73
Type:
Location: 94528 - 96351 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_74
Type:
Location: 96397 - 97461 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_75
Type: CAZyme
Location: 97469 - 98608 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_76
Type: CAZyme
Location: 98617 - 99441 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_77
Type: CAZyme
Location: 99444 - 100607 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_78
Type: pfam
Location: 100609 - 104265 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_79
Type: CAZyme
Location: 104231 - 105202 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_80
Type: pfam
Location: 105296 - 106606 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_81
Type: pfam
Location: 106938 - 108536 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_82
Type: CAZyme
Location: 108772 - 110517 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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