Cluster: ShaoY_2019_ERR3405831_bin.2_CGC112
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_6197 | ShaoY_2019_ERR3405831_bin.2_k141_6197_10 | 11629 | 12492 | - | CE4 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_6197 | ShaoY_2019_ERR3405831_bin.2_k141_6197_11 | 12624 | 13364 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_6197 | ShaoY_2019_ERR3405831_bin.2_k141_6197_12 | 13361 | 14083 | - | 3.A.1.105.18 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_10
Type: CAZyme
Location: 11629 - 12492 (-)
Type: CAZyme
Location: 11629 - 12492 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_11
Type: pfam
Location: 12624 - 13364 (-)
Type: pfam
Location: 12624 - 13364 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_6197_12
Type: TC
Location: 13361 - 14083 (-)
Type: TC
Location: 13361 - 14083 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.