Cluster: ShaoY_2019_ERR3405831_bin.2_CGC111
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5875 | ShaoY_2019_ERR3405831_bin.2_k141_5875_12 | 13875 | 15869 | - | GH151 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5875 | ShaoY_2019_ERR3405831_bin.2_k141_5875_13 | 15971 | 16822 | - | 3.A.1.1.18 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5875 | ShaoY_2019_ERR3405831_bin.2_k141_5875_14 | 16833 | 17714 | - | 3.A.1.1.41 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_5875 | ShaoY_2019_ERR3405831_bin.2_k141_5875_15 | 17893 | 19296 | - | SBP_bac_1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5875 | ShaoY_2019_ERR3405831_bin.2_k141_5875_16 | 19532 | 21268 | + | 8.A.59.2.1 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_12
Type: CAZyme
Location: 13875 - 15869 (-)
Type: CAZyme
Location: 13875 - 15869 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_13
Type: TC
Location: 15971 - 16822 (-)
Type: TC
Location: 15971 - 16822 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_14
Type: TC
Location: 16833 - 17714 (-)
Type: TC
Location: 16833 - 17714 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_15
Type: STP
Location: 17893 - 19296 (-)
Type: STP
Location: 17893 - 19296 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_16
Type: TC
Location: 19532 - 21268 (+)
Type: TC
Location: 19532 - 21268 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.