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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC110

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5875 ShaoY_2019_ERR3405831_bin.2_k141_5875_1 309 1832 - GH51_1
pfam ShaoY_2019_ERR3405831_bin.2_k141_5875 ShaoY_2019_ERR3405831_bin.2_k141_5875_2 1848 2108 - DUF6171
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5875 ShaoY_2019_ERR3405831_bin.2_k141_5875_3 2109 3611 - GH51_1
TC ShaoY_2019_ERR3405831_bin.2_k141_5875 ShaoY_2019_ERR3405831_bin.2_k141_5875_4 3847 4716 - 3.A.1.1.34
TC ShaoY_2019_ERR3405831_bin.2_k141_5875 ShaoY_2019_ERR3405831_bin.2_k141_5875_5 4718 5617 - 3.A.1.1.34
TC ShaoY_2019_ERR3405831_bin.2_k141_5875 ShaoY_2019_ERR3405831_bin.2_k141_5875_6 5650 7056 - 3.A.1.1.34
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_1
Type: CAZyme
Location: 309 - 1832 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_2
Type: pfam
Location: 1848 - 2108 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_3
Type: CAZyme
Location: 2109 - 3611 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_4
Type: TC
Location: 3847 - 4716 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_5
Type: TC
Location: 4718 - 5617 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5875_6
Type: TC
Location: 5650 - 7056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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