Cluster: ShaoY_2019_ERR3405831_bin.2_CGC106
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5517 | ShaoY_2019_ERR3405831_bin.2_k141_5517_181 | 213512 | 214180 | - | 2.A.38.4.4 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5517 | ShaoY_2019_ERR3405831_bin.2_k141_5517_182 | 214259 | 215551 | - | 2.A.38.4.3 |
| peptidase | ShaoY_2019_ERR3405831_bin.2_k141_5517 | ShaoY_2019_ERR3405831_bin.2_k141_5517_183 | 215963 | 217345 | - | C82.001 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_5517 | ShaoY_2019_ERR3405831_bin.2_k141_5517_184 | 217749 | 218870 | + | Big_2 | Big_2 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5517 | ShaoY_2019_ERR3405831_bin.2_k141_5517_185 | 218946 | 221108 | + | GH13_11 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5517_181
Type: TC
Location: 213512 - 214180 (-)
Type: TC
Location: 213512 - 214180 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5517_182
Type: TC
Location: 214259 - 215551 (-)
Type: TC
Location: 214259 - 215551 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5517_183
Type: peptidase
Location: 215963 - 217345 (-)
Type: peptidase
Location: 215963 - 217345 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5517_184
Type: pfam
Location: 217749 - 218870 (+)
Type: pfam
Location: 217749 - 218870 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5517_185
Type: CAZyme
Location: 218946 - 221108 (+)
Type: CAZyme
Location: 218946 - 221108 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.