Cluster: ShaoY_2019_ERR3405779_bin.1_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405779_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405779_bin.1_k141_3772 | ShaoY_2019_ERR3405779_bin.1_k141_3772_79 | 78384 | 79007 | + | 9.B.27.2.5 |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3772 | ShaoY_2019_ERR3405779_bin.1_k141_3772_80 | 79018 | 80646 | + | GT83 |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_3772 | ShaoY_2019_ERR3405779_bin.1_k141_3772_81 | 81021 | 81974 | + | 3.A.1.17.4 |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_3772 | ShaoY_2019_ERR3405779_bin.1_k141_3772_82 | 81985 | 82737 | + | 3.A.1.17.1 |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_3772 | ShaoY_2019_ERR3405779_bin.1_k141_3772_83 | 82749 | 83522 | + | 3.A.1.16.3 |
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3772_79
Type: TC
Location: 78384 - 79007 (+)
Type: TC
Location: 78384 - 79007 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3772_80
Type: CAZyme
Location: 79018 - 80646 (+)
Type: CAZyme
Location: 79018 - 80646 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3772_81
Type: TC
Location: 81021 - 81974 (+)
Type: TC
Location: 81021 - 81974 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3772_82
Type: TC
Location: 81985 - 82737 (+)
Type: TC
Location: 81985 - 82737 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3772_83
Type: TC
Location: 82749 - 83522 (+)
Type: TC
Location: 82749 - 83522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp018367495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.