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Cluster: ShaoY_2019_ERR3405779_bin.1_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405779_bin.1_k141_3634 ShaoY_2019_ERR3405779_bin.1_k141_3634_88 97664 101251 - 3.A.1.129.1
TC ShaoY_2019_ERR3405779_bin.1_k141_3634 ShaoY_2019_ERR3405779_bin.1_k141_3634_89 101391 102410 - 3.D.4.3.2
TC ShaoY_2019_ERR3405779_bin.1_k141_3634 ShaoY_2019_ERR3405779_bin.1_k141_3634_90 102401 103789 - 3.D.4.3.2
TF ShaoY_2019_ERR3405779_bin.1_k141_3634 ShaoY_2019_ERR3405779_bin.1_k141_3634_91 103852 104304 - Rrf2
pfam ShaoY_2019_ERR3405779_bin.1_k141_3634 ShaoY_2019_ERR3405779_bin.1_k141_3634_92 104525 105019 - MoCF_biosynth
CAZyme ShaoY_2019_ERR3405779_bin.1_k141_3634 ShaoY_2019_ERR3405779_bin.1_k141_3634_93 105028 105888 - CE4
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3634_88
Type: TC
Location: 97664 - 101251 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3634_89
Type: TC
Location: 101391 - 102410 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3634_90
Type: TC
Location: 102401 - 103789 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3634_91
Type: TF
Location: 103852 - 104304 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3634_92
Type: pfam
Location: 104525 - 105019 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3634_93
Type: CAZyme
Location: 105028 - 105888 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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