Cluster: ShaoY_2019_ERR3405779_bin.1_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405779_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_4196 | ShaoY_2019_ERR3405779_bin.1_k141_4196_118 | 110824 | 111933 | - | GT28 |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_4196 | ShaoY_2019_ERR3405779_bin.1_k141_4196_119 | 111933 | 113303 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_4196 | ShaoY_2019_ERR3405779_bin.1_k141_4196_120 | 113388 | 114374 | - | 9.B.146.1.6 |
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_4196_118
Type: CAZyme
Location: 110824 - 111933 (-)
Type: CAZyme
Location: 110824 - 111933 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_4196_119
Type: pfam
Location: 111933 - 113303 (-)
Type: pfam
Location: 111933 - 113303 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_4196_120
Type: TC
Location: 113388 - 114374 (-)
Type: TC
Location: 113388 - 114374 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp018367495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.