Cluster: ShaoY_2019_ERR3405779_bin.1_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: ShaoY_2019_ERR3405779_bin.1
- CGC Family ID: CGCFAM_00036
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_77 | 85195 | 86190 | + | GT2 |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_78 | 86249 | 87004 | + | GT2 |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_79 | 87071 | 89098 | + | Sulfatase |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_80 | 89165 | 90250 | + | GT4 |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_81 | 90292 | 91236 | + | DUF535 |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_82 | 91391 | 92518 | + | Wzy_C |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_83 | 92749 | 94185 | + | 9.B.18.1.2 |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_84 | 94185 | 95282 | + | GLF | NAD_binding_8 |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_85 | 95341 | 96096 | + | GT111 |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_86 | 96077 | 96997 | + | GT2 |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_87 | 96994 | 98166 | + | GT4 |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_88 | 98159 | 99130 | + | GT2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_89 | 99157 | 101070 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_3839 | ShaoY_2019_ERR3405779_bin.1_k141_3839_90 | 101156 | 102406 | + | 2.A.66.2.1 |
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_77
Type: CAZyme
Location: 85195 - 86190 (+)
Type: CAZyme
Location: 85195 - 86190 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_78
Type: CAZyme
Location: 86249 - 87004 (+)
Type: CAZyme
Location: 86249 - 87004 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_79
Type: pfam
Location: 87071 - 89098 (+)
Type: pfam
Location: 87071 - 89098 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_80
Type: CAZyme
Location: 89165 - 90250 (+)
Type: CAZyme
Location: 89165 - 90250 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_81
Type: pfam
Location: 90292 - 91236 (+)
Type: pfam
Location: 90292 - 91236 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_82
Type: pfam
Location: 91391 - 92518 (+)
Type: pfam
Location: 91391 - 92518 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_83
Type: TC
Location: 92749 - 94185 (+)
Type: TC
Location: 92749 - 94185 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_84
Type: pfam
Location: 94185 - 95282 (+)
Type: pfam
Location: 94185 - 95282 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_85
Type: CAZyme
Location: 95341 - 96096 (+)
Type: CAZyme
Location: 95341 - 96096 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_86
Type: CAZyme
Location: 96077 - 96997 (+)
Type: CAZyme
Location: 96077 - 96997 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_87
Type: CAZyme
Location: 96994 - 98166 (+)
Type: CAZyme
Location: 96994 - 98166 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_88
Type: CAZyme
Location: 98159 - 99130 (+)
Type: CAZyme
Location: 98159 - 99130 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_89
Type:
Location: 99157 - 101070 (+)
Type:
Location: 99157 - 101070 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3839_90
Type: TC
Location: 101156 - 102406 (+)
Type: TC
Location: 101156 - 102406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp018367495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.