Cluster: ShaoY_2019_ERR3405779_bin.1_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405779_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_2329 | ShaoY_2019_ERR3405779_bin.1_k141_2329_9 | 14782 | 16422 | + | GT83 |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_2329 | ShaoY_2019_ERR3405779_bin.1_k141_2329_10 | 16471 | 16839 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_2329 | ShaoY_2019_ERR3405779_bin.1_k141_2329_11 | 16910 | 17416 | - | Ribosomal_L10 |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_2329 | ShaoY_2019_ERR3405779_bin.1_k141_2329_12 | 17591 | 18301 | - | 1.C.82.1.1 |
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_2329_9
Type: CAZyme
Location: 14782 - 16422 (+)
Type: CAZyme
Location: 14782 - 16422 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_2329_10
Type: pfam
Location: 16471 - 16839 (-)
Type: pfam
Location: 16471 - 16839 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_2329_11
Type: pfam
Location: 16910 - 17416 (-)
Type: pfam
Location: 16910 - 17416 (-)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_2329_12
Type: TC
Location: 17591 - 18301 (-)
Type: TC
Location: 17591 - 18301 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp018367495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.