Cluster: ShaoY_2019_ERR3405726_bin.1_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_327 | ShaoY_2019_ERR3405726_bin.1_k141_327_31 | 30544 | 32331 | + | GH35 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_327 | ShaoY_2019_ERR3405726_bin.1_k141_327_32 | 32328 | 32804 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_327 | ShaoY_2019_ERR3405726_bin.1_k141_327_33 | 32844 | 33758 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_327 | ShaoY_2019_ERR3405726_bin.1_k141_327_34 | 33745 | 34563 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_327 | ShaoY_2019_ERR3405726_bin.1_k141_327_35 | 34575 | 34979 | + | 4.A.6.1.18 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_327_31
Type: CAZyme
Location: 30544 - 32331 (+)
Type: CAZyme
Location: 30544 - 32331 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_327_32
Type: TC
Location: 32328 - 32804 (+)
Type: TC
Location: 32328 - 32804 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_327_33
Type: TC
Location: 32844 - 33758 (+)
Type: TC
Location: 32844 - 33758 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_327_34
Type: TC
Location: 33745 - 34563 (+)
Type: TC
Location: 33745 - 34563 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_327_35
Type: TC
Location: 34575 - 34979 (+)
Type: TC
Location: 34575 - 34979 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.