Cluster: ShaoY_2019_ERR3405726_bin.1_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405726_bin.1_k141_206 | ShaoY_2019_ERR3405726_bin.1_k141_206_14 | 10711 | 13140 | - | 3.A.9.1.2 |
| TF | ShaoY_2019_ERR3405726_bin.1_k141_206 | ShaoY_2019_ERR3405726_bin.1_k141_206_15 | 13141 | 13605 | - | CtsR |
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_206 | ShaoY_2019_ERR3405726_bin.1_k141_206_16 | 14075 | 16309 | - | GH29 |
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_206 | ShaoY_2019_ERR3405726_bin.1_k141_206_17 | 16423 | 21486 | - | CBM71 | GH2 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_206_14
Type: TC
Location: 10711 - 13140 (-)
Type: TC
Location: 10711 - 13140 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_206_15
Type: TF
Location: 13141 - 13605 (-)
Type: TF
Location: 13141 - 13605 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_206_16
Type: CAZyme
Location: 14075 - 16309 (-)
Type: CAZyme
Location: 14075 - 16309 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_206_17
Type: CAZyme
Location: 16423 - 21486 (-)
Type: CAZyme
Location: 16423 - 21486 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.