Cluster: ShaoY_2019_ERR3405726_bin.1_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_181 | ShaoY_2019_ERR3405726_bin.1_k141_181_16 | 23119 | 24726 | - | GH13_31 |
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_181 | ShaoY_2019_ERR3405726_bin.1_k141_181_17 | 24795 | 27020 | - | GH31_15 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_181 | ShaoY_2019_ERR3405726_bin.1_k141_181_18 | 27666 | 28331 | - | 2.A.38.4.6 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_181 | ShaoY_2019_ERR3405726_bin.1_k141_181_19 | 28341 | 29723 | - | 2.A.38.4.3 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_181_16
Type: CAZyme
Location: 23119 - 24726 (-)
Type: CAZyme
Location: 23119 - 24726 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_181_17
Type: CAZyme
Location: 24795 - 27020 (-)
Type: CAZyme
Location: 24795 - 27020 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_181_18
Type: TC
Location: 27666 - 28331 (-)
Type: TC
Location: 27666 - 28331 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_181_19
Type: TC
Location: 28341 - 29723 (-)
Type: TC
Location: 28341 - 29723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.