Cluster: ShaoY_2019_ERR3405726_bin.1_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405726_bin.1_k141_1017 | ShaoY_2019_ERR3405726_bin.1_k141_1017_39 | 43817 | 45595 | - | 3.A.1.135.7 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_1017 | ShaoY_2019_ERR3405726_bin.1_k141_1017_40 | 45609 | 47345 | - | 3.A.1.135.7 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405726_bin.1_k141_1017 | ShaoY_2019_ERR3405726_bin.1_k141_1017_41 | 47679 | 48131 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_1017 | ShaoY_2019_ERR3405726_bin.1_k141_1017_42 | 48349 | 49458 | - | GH177 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1017_39
Type: TC
Location: 43817 - 45595 (-)
Type: TC
Location: 43817 - 45595 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1017_40
Type: TC
Location: 45609 - 47345 (-)
Type: TC
Location: 45609 - 47345 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1017_41
Type:
Location: 47679 - 48131 (-)
Type:
Location: 47679 - 48131 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1017_42
Type: CAZyme
Location: 48349 - 49458 (-)
Type: CAZyme
Location: 48349 - 49458 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.