Cluster: ShaoY_2019_ERR3405726_bin.1_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_1005 | ShaoY_2019_ERR3405726_bin.1_k141_1005_41 | 36546 | 38000 | - | GH32 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_1005 | ShaoY_2019_ERR3405726_bin.1_k141_1005_42 | 38010 | 38855 | - | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_1005 | ShaoY_2019_ERR3405726_bin.1_k141_1005_43 | 38857 | 39759 | - | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_1005 | ShaoY_2019_ERR3405726_bin.1_k141_1005_44 | 39844 | 41157 | - | 3.A.1.1.20 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1005_41
Type: CAZyme
Location: 36546 - 38000 (-)
Type: CAZyme
Location: 36546 - 38000 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1005_42
Type: TC
Location: 38010 - 38855 (-)
Type: TC
Location: 38010 - 38855 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1005_43
Type: TC
Location: 38857 - 39759 (-)
Type: TC
Location: 38857 - 39759 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_1005_44
Type: TC
Location: 39844 - 41157 (-)
Type: TC
Location: 39844 - 41157 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.