Cluster: ShaoY_2019_ERR3405726_bin.1_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405726_bin.1_k141_949 | ShaoY_2019_ERR3405726_bin.1_k141_949_46 | 44085 | 44594 | + | 2.A.88.9.1 |
| pfam | ShaoY_2019_ERR3405726_bin.1_k141_949 | ShaoY_2019_ERR3405726_bin.1_k141_949_47 | 44967 | 46913 | + | BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | HHH_2 | HHH_5 |
| pfam | ShaoY_2019_ERR3405726_bin.1_k141_949 | ShaoY_2019_ERR3405726_bin.1_k141_949_48 | 46923 | 47885 | + | DAGK_cat | YegS_C |
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_949 | ShaoY_2019_ERR3405726_bin.1_k141_949_49 | 47966 | 50275 | + | GH13_14 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_949_46
Type: TC
Location: 44085 - 44594 (+)
Type: TC
Location: 44085 - 44594 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_949_47
Type: pfam
Location: 44967 - 46913 (+)
Type: pfam
Location: 44967 - 46913 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_949_48
Type: pfam
Location: 46923 - 47885 (+)
Type: pfam
Location: 46923 - 47885 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_949_49
Type: CAZyme
Location: 47966 - 50275 (+)
Type: CAZyme
Location: 47966 - 50275 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.