Cluster: ShaoY_2019_ERR3405641_bin.1_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405641_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405641_bin.1_k141_3378 | ShaoY_2019_ERR3405641_bin.1_k141_3378_5 | 2881 | 5310 | - | 3.A.9.1.2 |
| TF | ShaoY_2019_ERR3405641_bin.1_k141_3378 | ShaoY_2019_ERR3405641_bin.1_k141_3378_6 | 5311 | 5775 | - | CtsR |
| CAZyme | ShaoY_2019_ERR3405641_bin.1_k141_3378 | ShaoY_2019_ERR3405641_bin.1_k141_3378_7 | 6053 | 8287 | - | GH29 |
| CAZyme | ShaoY_2019_ERR3405641_bin.1_k141_3378 | ShaoY_2019_ERR3405641_bin.1_k141_3378_8 | 8401 | 12996 | - | CBM71 | GH2 |
Gene ID: ShaoY_2019_ERR3405641_bin.1_k141_3378_5
Type: TC
Location: 2881 - 5310 (-)
Type: TC
Location: 2881 - 5310 (-)
Gene ID: ShaoY_2019_ERR3405641_bin.1_k141_3378_6
Type: TF
Location: 5311 - 5775 (-)
Type: TF
Location: 5311 - 5775 (-)
Gene ID: ShaoY_2019_ERR3405641_bin.1_k141_3378_7
Type: CAZyme
Location: 6053 - 8287 (-)
Type: CAZyme
Location: 6053 - 8287 (-)
Gene ID: ShaoY_2019_ERR3405641_bin.1_k141_3378_8
Type: CAZyme
Location: 8401 - 12996 (-)
Type: CAZyme
Location: 8401 - 12996 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp902479835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.