Cluster: ShaoY_2019_ERR3405630_bin.1_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405630_bin.1
- CGC Family ID: CGCFAM_09060
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405630_bin.1_k141_1661 | ShaoY_2019_ERR3405630_bin.1_k141_1661_6 | 4185 | 5516 | + | 9.A.40.2.1 |
| TC | ShaoY_2019_ERR3405630_bin.1_k141_1661 | ShaoY_2019_ERR3405630_bin.1_k141_1661_7 | 5852 | 7831 | + | 3.A.1.5.19 |
| TC | ShaoY_2019_ERR3405630_bin.1_k141_1661 | ShaoY_2019_ERR3405630_bin.1_k141_1661_8 | 7897 | 9393 | + | 3.A.1.5.32 |
| TC | ShaoY_2019_ERR3405630_bin.1_k141_1661 | ShaoY_2019_ERR3405630_bin.1_k141_1661_9 | 9393 | 10319 | + | 3.A.1.5.10 |
| TC | ShaoY_2019_ERR3405630_bin.1_k141_1661 | ShaoY_2019_ERR3405630_bin.1_k141_1661_10 | 10328 | 11395 | + | 3.A.1.5.25 |
| TC | ShaoY_2019_ERR3405630_bin.1_k141_1661 | ShaoY_2019_ERR3405630_bin.1_k141_1661_11 | 11406 | 12332 | + | 3.A.1.5.25 |
| CAZyme | ShaoY_2019_ERR3405630_bin.1_k141_1661 | ShaoY_2019_ERR3405630_bin.1_k141_1661_12 | 12767 | 13750 | + | CE7 |
Gene ID: ShaoY_2019_ERR3405630_bin.1_k141_1661_6
Type: TC
Location: 4185 - 5516 (+)
Type: TC
Location: 4185 - 5516 (+)
Gene ID: ShaoY_2019_ERR3405630_bin.1_k141_1661_7
Type: TC
Location: 5852 - 7831 (+)
Type: TC
Location: 5852 - 7831 (+)
Gene ID: ShaoY_2019_ERR3405630_bin.1_k141_1661_8
Type: TC
Location: 7897 - 9393 (+)
Type: TC
Location: 7897 - 9393 (+)
Gene ID: ShaoY_2019_ERR3405630_bin.1_k141_1661_9
Type: TC
Location: 9393 - 10319 (+)
Type: TC
Location: 9393 - 10319 (+)
Gene ID: ShaoY_2019_ERR3405630_bin.1_k141_1661_10
Type: TC
Location: 10328 - 11395 (+)
Type: TC
Location: 10328 - 11395 (+)
Gene ID: ShaoY_2019_ERR3405630_bin.1_k141_1661_11
Type: TC
Location: 11406 - 12332 (+)
Type: TC
Location: 11406 - 12332 (+)
Gene ID: ShaoY_2019_ERR3405630_bin.1_k141_1661_12
Type: CAZyme
Location: 12767 - 13750 (+)
Type: CAZyme
Location: 12767 - 13750 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.