Cluster: ShaoY_2019_ERR3405592_bin.2_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3405592_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_185 | 186194 | 187714 | - | GT4 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_186 | 187727 | 190099 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_187 | 190092 | 190532 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_188 | 190529 | 192058 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_189 | 192042 | 193622 | - | 3.A.5.10.1 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_190 | 193632 | 194849 | - | 3.A.5.10.1 |
| CAZyme | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_191 | 194935 | 196164 | - | GT8 |
| CAZyme | ShaoY_2019_ERR3405592_bin.2_k141_1327 | ShaoY_2019_ERR3405592_bin.2_k141_1327_192 | 196180 | 197406 | - | GT8 |
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_185
Type: CAZyme
Location: 186194 - 187714 (-)
Type: CAZyme
Location: 186194 - 187714 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_186
Type: TC
Location: 187727 - 190099 (-)
Type: TC
Location: 187727 - 190099 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_187
Type: TC
Location: 190092 - 190532 (-)
Type: TC
Location: 190092 - 190532 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_188
Type: TC
Location: 190529 - 192058 (-)
Type: TC
Location: 190529 - 192058 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_189
Type: TC
Location: 192042 - 193622 (-)
Type: TC
Location: 192042 - 193622 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_190
Type: TC
Location: 193632 - 194849 (-)
Type: TC
Location: 193632 - 194849 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_191
Type: CAZyme
Location: 194935 - 196164 (-)
Type: CAZyme
Location: 194935 - 196164 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1327_192
Type: CAZyme
Location: 196180 - 197406 (-)
Type: CAZyme
Location: 196180 - 197406 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.