Cluster: ShaoY_2019_ERR3405592_bin.2_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405592_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405592_bin.2_k141_1483 | ShaoY_2019_ERR3405592_bin.2_k141_1483_356 | 354802 | 356250 | + | GH13_5 |
| pfam | ShaoY_2019_ERR3405592_bin.2_k141_1483 | ShaoY_2019_ERR3405592_bin.2_k141_1483_357 | 356338 | 358956 | - | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| pfam | ShaoY_2019_ERR3405592_bin.2_k141_1483 | ShaoY_2019_ERR3405592_bin.2_k141_1483_358 | 358977 | 359462 | - | LOR |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1483 | ShaoY_2019_ERR3405592_bin.2_k141_1483_359 | 360139 | 361209 | - | 3.A.1.11.7 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1483 | ShaoY_2019_ERR3405592_bin.2_k141_1483_360 | 361206 | 361979 | - | 3.A.1.11.7 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1483 | ShaoY_2019_ERR3405592_bin.2_k141_1483_361 | 361976 | 362782 | - | 3.A.1.11.7 |
| TC | ShaoY_2019_ERR3405592_bin.2_k141_1483 | ShaoY_2019_ERR3405592_bin.2_k141_1483_362 | 362763 | 363920 | - | 3.A.1.11.7 |
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1483_356
Type: CAZyme
Location: 354802 - 356250 (+)
Type: CAZyme
Location: 354802 - 356250 (+)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1483_357
Type: pfam
Location: 356338 - 358956 (-)
Type: pfam
Location: 356338 - 358956 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1483_358
Type: pfam
Location: 358977 - 359462 (-)
Type: pfam
Location: 358977 - 359462 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1483_359
Type: TC
Location: 360139 - 361209 (-)
Type: TC
Location: 360139 - 361209 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1483_360
Type: TC
Location: 361206 - 361979 (-)
Type: TC
Location: 361206 - 361979 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1483_361
Type: TC
Location: 361976 - 362782 (-)
Type: TC
Location: 361976 - 362782 (-)
Gene ID: ShaoY_2019_ERR3405592_bin.2_k141_1483_362
Type: TC
Location: 362763 - 363920 (-)
Type: TC
Location: 362763 - 363920 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| ShaoY_2019_ERR3405592_bin.2_k141_1483_361 | vegan > omnivore | 3.85675 | 0.01604 |